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Study [ibdmdb] study / subjects / design / samples / assays

Basic properties of your study This page shows the basic information about your study, as well as information on the authorizations.

Publications

  • Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases.
    Lloyd-Price J, Arze C, Ananthakrishnan AN, Schirmer M, Avila-Pacheco J, Poon TW, Andrews E, Ajami NJ, Bonham KS, Brislawn CJ, Casero D, Courtney H, Gonzalez A, Graeber TG, Hall AB, Lake K, Landers CJ, Mallick H, Plichta DR, Prasad M, Rahnavard G et al.

Contacts

  • Dede Sener, Duygu
    Data Submission
  • Coort, Susan
    Data Submission

Authorization

Public Design
Yes
Readers
duygu.dedesener
Writers
duygu.dedesener
Study title
ibdmdb
Template
Intervention/Observation study
title
ibdmdb
description
The IBDMDB will provide an integrated resource for analyzing the gut microbial ecosystem in the context of IBD, improving our ability to understand, diagnose, and treat IBD. It will use several existing, well-described patient cohorts to provide many different types of longitudinal data.
code
ibdmdb
startDate
2019-01-01 00:00:00.0
Study type
Human Intervention
Objectives
By integrating taxonomic, metagenomic, metatranscriptomic, metaproteomic, and metabolic data on the microbiome, we can follow over time which microbial species are present, which biochemical functions they are capable of performing, which functions they are actually performing at any given point in time, and which nutrients are available to the host and microbial community
Supplementary file 1
IBD_metadata.csv

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